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http://hdl.handle.net/11375/22780
Title: | An Interactive System for Sequence Analysis |
Authors: | Chen, Xiangdong |
Advisor: | Jiang, Tao |
Department: | Computation |
Keywords: | sequence;analysis |
Publication Date: | May-1994 |
Abstract: | Sequence Analysis Tool (SAT) is an X-window (OPEN LOOK version) based interactive system developed for sequence analysis. In this first version, it provides a friendly graphical user interface and convenient functions for performing various tasks required in sequence alignment. In particular, space-efficient algorithms for pairwise alignment and 3-star alignment are implemented as functionalities, which can be used to serve most sequence alignment tasks and therefore provide a basis for further improvement of this tool. SAT is also targeted at providing a testing platform for performance analysis of various alignment-related algorithms. A set of procedures is developed to provide an application programming interface with which other related programs can be easily connected to SAT. SAT is programmed in C/Xlib/OLIT. The object-oriented style makes further maintenance and improvement easy. |
URI: | http://hdl.handle.net/11375/22780 |
Appears in Collections: | Digitized Open Access Dissertations and Theses |
Files in This Item:
File | Description | Size | Format | |
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chen_xiangdong_1994May_masters.pdf | 6.07 MB | Adobe PDF | View/Open |
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